Amy Pooler
Analyst · H.C. Wainwright
Thanks, Sandy. Turning now to prion disease, which affects approximately 600 patients a year in the U.S. and Canada and around 900 in Europe. Prion disease is an awful disease, typically fatal in 12 to 15 months. There are no approved disease-modifying therapies that currently exist. Prion is an excellent fit for zinc finger repression. We know that prion knockout animals do not get the disease, prion reduction can delay or prevent disease and neuronal prion production, a protein reduction also prevents disease.
We, therefore, believe that the repression of prion expression may slow or halt disease progression and neurodegeneration.
We knew that we wanted to achieve widespread delivery to the brain for prion disease, given that misfolded prion protein spreads throughout the brain as the disease progresses. As mentioned earlier, we therefore packaged our prion-targeted zinc finger repressor into the newly identified STAC-BBB capsid and administer it intravenously to 3 separate nonhuman primates.
In order to assess which regions of the brain STAC-BBB delivers to, we collected 220 bunches from each animal and conducted RT-qPCR analysis to measure how much prion-targeted zinc finger was expressed. Each dot on these brain images illustrates the location of one of the punches we collected, and each row represents one of the 3 animals that was dosed. The color represents the level of prion-targeted zinc finger expression that was measured.
As you can see from the key in the top right, ZFR expression levels are indicated by the intensity of green for each one of the punches. These results confirmed the GFP protein expression data and support that STAC-BBB mediated consistent brain wide expression of prion-targeted zinc finger repressor in all 3 animals.
We next wanted to quantify if expression correlated with an associated reduction in prion mRNA in these brain punches. We were happy to see a reduction of prion expression in all 35 brain regions that we analyzed.
As a reminder, these brain punches do not solely consist of neurons, but additional brain cell types as well. Cells such as oligodendrocytes, astrocytes and microglia. Because prion is expressed in multiple brain cell types, when we are seeing total prion reduction here at the bulk brain level of 20% to 30%, the percent reduction in individual neurons must be significantly higher. When looking at the single cell analysis of similar studies in the past, including the tau data I will show you in a moment, we have seen upwards of 80% reduction at the individual neuron level.
So how do we think the level of repression we saw in the green bar graph just now will impact disease progression. Based on this level of bulk repression observed in a mouse model of aggressive prion disease, we concluded that zinc finger repressors can significantly extend survival in prion-infected animals. In collaboration with the Broad Institute, we engineered zinc finger repressor to target the mouse prion gene, and administered these as a single dose in mice, either 60 or 122 days following prion infection.
Without any intervention, you can see that clearly, the untreated mice consistently die around 160 days post infection. However, mice treated with a single administration of a prion zinc finger repressor showed notable extended survival compared to those control animals living to beyond 400 or 500 days after infection, which is within the normal lifespan of a mouse. This is an incredible alteration in disease progression.
In a separate published study, performance of ASOs also illustrated on this graphic was evaluated in the same mouse model. These data show that multiple treatments were required starting from approximately 70 days post infection as shown in graph 2, to be able to induce an extension in lifespan. And when ASOs were administered at a later time point post infection as shown in graph 4, when the disease was further progressed, there is only minimal extension in lifespan.
Conversely, even when administered 122 days post infection shown in graph 3, which is a time line more aligned to what we believe we will see in the clinic. A single dose of the zinc finger repressor was still able to profoundly delay disease progression and extend survival in mice. These data reflect the 2e13 vg per kilogram dose level, which is considered a mid-dose of AAV, showing that we have the potential to dose higher, should we decide that that's appropriate.
The prion program is progressing with our clinical lead zinc finger represser that showed greater than 95% prion reduction per cell, with no detectable off targets and meaningful potency, both in vitro and in vivo. We expect to begin clinical enabling toxicology studies in the second half of this year and anticipate submitting a clinical trial application in the U.K. for prion in the fourth quarter of 2025.
Moving now to tau, a well-known target for the treatment of neurodegenerative diseases called tauopathies. Recent data from Biogen's ASO study shows stabilization of cognitive function with regular injections of ASOs addressing tau, which seems to cement tau's implication in Alzheimer's disease. In addition, there are also a host of tauopathies disorders that span more than 12 distinct indications, including progressive supranuclear palsy, frontotemporal dementia and account for a very large patient population with a high unmet medical need that we could potentially address with our zinc finger approach.
Using a combination of STAC-BBB delivery capabilities in the tau zinc finger repressor we see a potential ability to halt disease progression with a onetime IV administration for various telepathy indications, given the capsid's ability to demonstrate the ability to reach all the brain regions with high specificity in nonhuman primates. Here, we packaged our clinical lead tau zinc finger repressor, which shows fantastic repression of tau exceptionally specific expression and no detectable off targets in vitro.
Into our STAC-BBB capsid and tested at 3 different intravenously administered doses, 5e12, 2e13 and 1e14 vector genomes per kilo. Similar to the slide we saw before on prion, here, we are looking for widespread expression of the zinc finger repressor throughout the brain. Here, we were also assessing the 3 dose levels, and we're very pleased to see dose-dependent expression with the intensity of green increasing as the dose increased, indicating a higher level of zinc finger expression.
Importantly, and similarly to the prion study, we are not only looking at the level of zinc finger expression but also the corresponding levels of tau repression. Here, we show these data for the deep brain thalamic region, including the lateral geniculate nucleus. Like prion, tau is a gene that is expressed not only in neurons, but also in astrocytes and oligodendrocytes. We know that tau expression and neurons is the critical driver of disease pathology, which is why we are so focused on repressing it in these cells.
In this case, the clinical lead construct uses a synapsin promoter. So we know that we are only targeting zinc finger expression to neurons. We were pleased to see a dose-dependent increase in zinc finger expression that correlated with a dose-dependent decrease of tau expression.
Like in the prion experiment, this is a bulk analysis of whole brain punches, which consists of many cell types, not just neurons. So to be able to achieve this level of tau repression at the bulk level, we must be achieving significantly higher repression at the single cell level in neurons.
Here, you'll see that we achieved an almost 50% reduction in tau at the bulk level and at the top dose in the lateral geniculate nucleus, which is likely correlated to the higher proportion of neurons we see in this region as illustrated by the dark staining in the image above from the same brain region in the GFP arms of the study.
Let's take a moment to look more closely at the pons part of the brain stem and a key brain region in the telepathy called progressive supranuclear palsy.
On the left is the bulk tissue punch analysis for this region. And like what I showed you on the previous slide, we saw a correlation between increased zinc finger expression and decreased tau expression in a dose-dependent manner. Because understanding the activity of the zinc finger at the single cell level is so important, in addition to the bulk brain tissue analysis, we also utilized a multiplexed RNA scope and immunohistochemistry approach to visualize ZFR expression and tau repression in neurons.
This data is beautiful and shows a high level of detail that is only recently possible, allowing us to understand what's going on at the single cell level. On the top is the pons image control animal, and the bottom is from an animal treated with the top dose of STAC-BBB encoding the tau clinical lead zinc finger repressor. In purple are the neurons, which in the control animals robustly express tau mRNA shown in white.
Conversely, in the bottom row of images, you can clearly see that where the zinc finger was expressed in green, we saw a striking corresponding reduction of tau. We calculate that approximately 80% of the neurons express zinc fingers in this region, which resulted in almost complete repression of tau in those cells. Here, we show more of this beautiful single cell data demonstrating the power of both STAC-BBB and our tau zinc finger repressor working together in this instance in the motor cortex.
On the top row, you see the vehicle control where tau mRNA was clearly expressed across the brain region, in particular, within neurons and purple, and glia in Orange. Here, no zinc finger repressor was detected and the tau mRNA levels remain consistent between the different images.
Conversely, at the bottom, we see a potent repression of tau mRNA across the image on the left. Zooming into this a little more in the middle image, and as indicated in green, we detected the zinc finger repressor particularly in neurons.
And importantly, where we saw the zinc finger expression, we saw an almost complete elimination of tau mRNA, most visible in the bottom right panel. This is truly encouraging data that gives us great hope for the promise of a single administration of STAC-BBB and our tau zinc finger repressor.
For our tau program, we have identified the clinical lead zinc finger and IND-enabling activities are well advanced, making this program well suited to move into the clinic either ourselves or with a potential partner.
Toxicology studies could be initiated as early as the second quarter of this year with a potential IND submission as early as the fourth quarter of 2025.
Finally, I'll outline our lead neurology indication, Nav1.7 and how we're using this program as a way to balance the portfolio through a diversified delivery approach. Our Nav1.7 program does not leverage STAC-BBB, but instead uses a known AAV delivery capsid that is already in the clinic.
Our aim here was to develop a medicine capable of reaching the dorsal root ganglia as Nav1.7 is a voltage-gated sodium channel expressed there and mutations in this channel play a critical role in pain perception. By potently reducing Nav1.7 in the DRG, we believe we can prevent the transmission of no susceptive pain signals in order to treat chronic neuropathic pain and a host of other indications.
There is an urgent need for new therapies in this space and a potentially very large patient population to address. So we are very motivated to be moving forward with our Nav1.7 program and plan to initially focus on patients with small fiber neuropathy. As you see here, preclinical data from our clinical lead zinc finger repressor targeting SCN9A, the gene that enclose Nav1.7 demonstrated a meaningful repression in vitro with exquisite levels of specificity as we only saw a repression of Nav1.7 without impacting any other sodium channels.
It's difficult to use small molecules to treat these channels because Nav channels share a lot of structural similarities at the protein level. However, at the DNA level, they are distinct, which makes them well suited to the zinc finger technology.
Taking this into animal models on the left, you see a study targeting neurons in the DRG to groups of cells outside the spinal column and the blood-brain barrier.
Using intrathecal injection of the zinc finger repressor in mice, we observed significant expression, which you see in red. This then resulted in an almost complete elimination of the SCN9A expression, shown by the absence of light, which indicated a potent knockdown of the Nav1.7 gene at the mRNA level.
If you look at the middle pain, you can understand what this looks like in a mouse model. We use the gold standard mouse model of neuropathic pain called the spared nerve injury model and performed a single injection of the zinc finger repressor intrathecally after the nerves are cut to induce pain.
The single administration of our zinc finger repressor resulted in a full reversal of pain perception in these animals as indicated by the orange and dark red bars in the bottom middle pain, which are very similar to the results of those animals that have never received the surgery as indicated in blue, which is very impressive.
Finally, you see the nonhuman primate study on the far right, where we wanted to show that we can target the DRG and achieve potent repression of SCN9A. In the study, we administered 3 different doses of zinc fingers intrathecally and we saw dose-dependent and potent repression of Nav1.7. Importantly, there's a lot of research emphasis and peer-reviewed publications about identifying any potential DRG toxicity. And we did not find anything in these studies that would be indicative of such toxicity, which is crucial as we seek to advance this program into the clinic.
We are very encouraged by the Nav1.7 program, and we look forward to completing these final toxicology studies. We expect to submit an IND for this program in the fourth quarter of this year.
I will now hand back to Sandy to wrap this up before we open for Q&A.